计算机科学 ›› 2013, Vol. 40 ›› Issue (3): 36-37.
• 2012多值逻辑专栏 • 上一篇 下一篇
詹 科，王 靖，袁 良，张云泉
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摘要： 介绍了蛋白质定量软件的设计及测试结果，分析结果表明:P-QuantWiz软件在曙光600。的Intel集群部分，测试规模达到2048核，在256核加速比仍在增加。相对P-QuantWiz软件在单CPU运行的结果，PG-QuantWiz软件在单CPU运行的加速比为8.1，在16个GPU上运行的加速比为14.18，并行效率为89%。
关键词: MPI, CUDA，蛋白质定量
Abstract: We introduced the design and the testing results of protein quantification software. The analytical results indicate that the testing size reaches 2048 cores, when P-QuantWiz runs on the clusters of DAWNING 6000，and the speed-up ratio still increases when we use 256 cores. Compared with the results of P-QuantWiz which is ran on one CPU, the speed-up ratio of PGQuantWiz on one single GPU is 8.1. Compared with the results which is ran on one GPU, the speed-up ratio of PGQuantWiz on 16 GPU is 14.18, and the parallel efficiency is 89%.
Key words: MPI, CUDA, Protein ctuantification
詹 科，王 靖，袁 良，张云泉. 基于MPI和CUDA的蛋白质定量软件的设计和分析[J]. 计算机科学, 2013, 40(3): 36-37. https://doi.org/
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