Computer Science ›› 2015, Vol. 42 ›› Issue (7): 262-264.doi: 10.11896/j.issn.1002-137X.2015.07.056
Previous Articles Next Articles
WANG Cai-xia, LV Qiang, LI Hai-ou and LUO Sheng
| [1] Marks D S,Colwell L J,Sheridan R,et al.Protein 3D structure computed from evolutionary sequence variation[J].PloS one,2011,6(12):e28766 [2] Hopf T A,Colwell L J,Sheridan R,et al.Three-dimensionalstructures of membrane proteins from genomic sequencing[J].Cell,2012,149(7):1607-1621 [3] Wang Zhi-yong,Xu Jin-bo.Predicting protein contact map using evolutionary and physical constraints by integer programming[J].Bioinformatics,2013,29(13):i266-i273 [4] Ma Jian-zhu,Wang Sheng,Xu Jin-bo.Joint Multi-family Evolutionary Coupling Analysis for Protein Contact Prediction[J].arXiv preprint arXiv:1312.2988,3 [5] Wu Si-tao,Zhang Yang.MUSTER:improving protein sequence profile-profile alignments by using multiple sources of structure information[J].Proteins:Structure,Function,and Bioinformatics,2008,72(2):547-556 [6] Lazaridis T,Karplus M.Effective energy functions for proteinstructure prediction[J].Current opinion in structural biology,2000,10(2):139-145 [7] Jones D T,Buchan D W A,Cozzetto D,et al.PSICOV:precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments[J].Bioinforma-tics,2012,28(2):184-190 [8] Kryshtafovych A,Monastyrskyy B,Fidelis K.CASP Prediction Center infrastructure and evaluation measures in CASP10 and CASP ROLL[J].Proteins:Structure,Function,and Bioinformatics,2014,82(S2):7-13 [9] Ezkurdia I,Grana O,Izarzugaza J M G,et al.Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8[J].Proteins:Structure,Function,and Bioinformatics,2009,77(S9):196-209 [10] 郭海娟,吕强,吴宏杰,等.一个识别蛋白质折叠模式的 SVM 分类器[J].生物信息学,2010(4):287-290 Guo Hai-juan,Lv Qiang,Wu Hong-jie,et al.A svm classifier for protein fold recognition[J].China Journal of Bioinformatics,2010(4):287-290 [11] Altschul S F,Koonin E V.Iterated profile searches with PSI-BLAST—a tool for discovery in protein databases[J].Trends in biochemical sciences,1998,23(11):444-447 [12] Cheng Jian-lin,Baldi P.Improved residue contact predictionusing support vector machines and a large feature set[J].BMC bioinformatics,2007,8(113):1-9 |
| No related articles found! |
|
||
Home