Computer Science ›› 2022, Vol. 49 ›› Issue (1): 264-270.doi: 10.11896/jsjkx.201100129
• Artificial Intelligence • Previous Articles Next Articles
LI Jia-wen, GUO Bing-hui, YANG Xiao-bo, ZHENG Zhi-ming
CLC Number:
[1]MASYS D R.New directions in bioinformatics[J].Journal of research of the National Institute of Standards and Technology,1989,94(1):59. [2]BARABASI A L,OLTVAI Z N.Network biology:understan-ding the cell's functional organization[J].Nature Reviews Gene-tics,2004,5(2):101. [3]KERMACK W O,MCKENDRICK A G.A contribution to the mathematical theory of epidemics[J].Proceedings of the Royal Society of London.Series A,Containing Papers of a Mathematical and Physical Character,1927,115(772):700-721. [4]COWEN L,IDEKER T,RAPHAEL B J,et al.Network propagation:a universal amplifier of genetic associations[J].Nature Reviews Genetics,2017,18(9):551. [5]WESTON J,KUANG R,LESLIE C,et al.Protein ranking bysemi-supervised network propagation[J].BMC Bioinformatics,2006,7(1):S10. [6]WESTON J,ELISSEEFF A,ZHOU D,et al.Protein ranking:from local to global structure in the protein similarity network[J].Proceedings of the National Academy of Sciences,2004,101(17):6559-6563. [7]QI Y,SUHAIL Y,LIN Y,et al.Finding friends and enemies in an enemies-only network:a graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions[J].Genome Research,2008,18(12):1991-2004. [8]VANDIN F,UPFAL E,RAPHAEL B J.Algorithms for detecting significantly mutated pathways in cancer[J].Journal of Computational Biology,2011,18(3):507-522. [9]VANUNU O,MAGGER O,RUPPIN E,et al.Associating genes and protein complexes with disease via network propagation[J].PLoS Computational Biology,2010,6(1):e1000641. [10]QIAN Y,BESENBACHER S,MAILUND T,et al.Identifying disease associated genes by network propagation[C]//BMC Systems Biology.BioMed Central,2014,8(1):S6. [11]MACROPOL K,CAN T,SINGH A K.RRW:repeated random walks on genome-scale protein networks for local clusterdisco-very[J].BMC Bioinformatics,2009,10(1):283. [12]WANG X P.Research on disease-causing gene prediction algorithm based on heterogeneous information fusion[D].Harbin Institute of Technology,2019. [13]ZHAO N,LI J,WANG J,et al.Relatively important node mi-ning method based on adjacent layer propagation[J].Journal of University of Electronic Science and Technology of China,2021,50(1):121-126. [14]PEARSON K.The problem of the random walk[J].Nature,1904,72(1867):342. [15]ALANIS-LOBATO G,ANDRADE-NAVARRO M A,SCHAEFER M H.HIPPIE v2.0:enhancing meaningfulness and reliability of protein-protein interaction networks[J].Nucleic Acids Research,2016,45(1):D408-D414. [16]KÖHLER S,BAUER S,HORN D,et al.Walking the interactome for prioritization of candidate disease genes[J].American Journal of Human Genetics,2008,82(4):949-958. [17]ELKAIM E,NEVEN B,BRUNEAU J,et al.Clinical and immunologic phenotype associated with activated phosphoinositide 3-kinase δ syndrome 2:a cohort study[J].Journal of Allergy and Clinical Immunology,2016,138(1):210-218.e9. [18]A2M alpha-2-macroglobulin “Summary” [EB/OL].https://www.ncbi.nlm.nih.gov/gene/2. [19]SAMELSON-JONES B J,ARRUDA V R.Protein-engineeredcoagulation factors for hemophilia gene therapy[J].Molecular Therapy-Methods & Clinical Development,2019,12:184-201. [20]SABAIE H,AHANGAR N K,GHAFOURI-FARD S,et al.Clinical and genetic features of PEHO and PEHO-Like syndromes:A scoping review[J].Biomedicine & Pharmacotherapy,2020,131:110793. |
[1] | XIE Liang-xu, LI Feng, XIE Jian-ping, XU Xiao-jun. Predicting Drug Molecular Properties Based on Ensembling Neural Networks Models [J]. Computer Science, 2021, 48(9): 251-256. |
[2] | WANG Xue-guang, ZHANG Ai-xin, DOU Bing-lin. Non-linear Load Capacity Model of Complex Networks [J]. Computer Science, 2021, 48(6): 282-287. |
[3] | MA Yuan-yuan, HAN Hua, QU Qian-qian. Importance Evaluation Algorithm Based on Node Intimate Degree [J]. Computer Science, 2021, 48(5): 140-146. |
[4] | YIN Zi-qiao, GUO Bing-hui, MA Shuang-ge, MI Zhi-long, SUN Yi-fan, ZHENG Zhi-ming. Autonomous Structural Adjustment of Crowd Intelligence Network: Begin from Structure of Biological Regulatory Network [J]. Computer Science, 2021, 48(5): 184-189. |
[5] | ZHAO Man-yu, YE Jun. Synchronization of Uncertain Complex Networks with Sampled-data and Input Saturation [J]. Computer Science, 2021, 48(11A): 481-484. |
[6] | CHENG Zhe, BAI Qian, ZHANG Hao, WANG Shi-pu and LIANG Yu. Improving Hi-C Data Resolution with Deep Convolutional Neural Networks [J]. Computer Science, 2020, 47(6A): 70-74. |
[7] | ZHAO Lei, ZHOU Jin-he. ICN Energy Efficiency Optimization Strategy Based on Content Field of Complex Networks [J]. Computer Science, 2019, 46(9): 137-142. |
[8] | LIU Xiao-dong, WEI Hai-ping, CAO Yu. Modeling and Stability Analysis for SIRS Model with Network Topology Changes [J]. Computer Science, 2019, 46(6A): 375-379. |
[9] | FU Li-dong, LI Dan, LI Zhan-li. Following-degree Tree Algorithm to Detect Overlapping Communities in Complex Networks [J]. Computer Science, 2019, 46(12): 322-326. |
[10] | BIN Sheng, SUN Geng-xin. Collaborative Filtering Recommendation Algorithm Based on Multi-relationship Social Network [J]. Computer Science, 2019, 46(12): 56-62. |
[11] | SHAN Na, LI Long-jie, LIU Yu-yang, CHEN Xiao-yun. Link Prediction Based on Correlation of Nodes’ Connecting Patterns [J]. Computer Science, 2019, 46(12): 20-25. |
[12] | GAO Hua-bing, SONG Cong-cong, CHEN Bo, LIU Zhi. Traffic Efficiency Analysis of Traffic Road Network Based on Percolation Theory [J]. Computer Science, 2019, 46(11A): 127-133. |
[13] | SONG Yan-qiu, LI Gui-jun, LI Hui-jia. Community Label Detection Algorithm Based on Potential Background Information [J]. Computer Science, 2018, 45(6A): 314-317. |
[14] | LUO Jin-liang, JIN Jia-cai and WANG Lei. Evaluation Method for Node Importance in Air Defense Networks Based on Functional Contribution Degree [J]. Computer Science, 2018, 45(2): 175-180. |
[15] | CEHN Jun-hua, BIAN Zhai-an, LI Hui-jia, GUAN Run-dan. Measuring Method of Node Influence Based on Relative Entropy [J]. Computer Science, 2018, 45(11A): 292-298. |
|